Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVRAEHCRGAGGCDECPSVMPEHPTALFHDVAAIALAQPGAEPGAMMGFPCRPALLPHLSRAVMRCVRTRSASTSLGVSVIAGQLPAAGSRHRLGAPCRHVRWWLASDGHWGMVSYIPTALNVSMGGIVGWRCVP
2MN4 Chain:A ((1-94))
MTPEQR--------EFLPEILAEIIANLDPTKILEELLRRG--------------LLTPAELQEVLDLKTPEEQAKKLIDFIL-KLSPADVQARINVLRAH--------GYQALADKLNKYLTLE-----------
General information:
TITO was launched using:
RESULT:
Template:
2MN4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33412 for 574 contacts (-58.2/contact) +
2D Compatibility (PS) -9596 + (NN) 2320 + (LL) 1460
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -42878.0 ( -74.70 by residue)
QMean score : -0.002
(partial model without unconserved sides chains):
PDB file :
Tito_2MN4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2MN4-query.scw
PDB file :
Tito_Scwrl_2MN4.pdb
: