Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIVGVGIDLVSIPDFAEQVDQ----PGTVFAET---FTPGERRDASDKSSSAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEDIH-RDIEVVTDMWGRPRVRLTGAIAEYLADVTI---HVSLTHEGDTAAAVAILEAP
2WDS Chain:A ((21-142))
MSIIGVGIDVAEVERFGAALERTPALAGRLFLESELLLPGGERRGVAS--------LAARFAAKEALAKALGA---------PAGLLWTDAEVWVEAGGRPRLRVTGTVAARAAELGVASWHVSLSADAGIASAVVIAE--
General information:
TITO was launched using:
RESULT:
Template:
2WDS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67252 for 784 contacts (-85.8/contact) +
2D Compatibility (PS) -12263 + (NN) -4631 + (LL) 1212
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -93334.0 ( -119.05 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_2WDS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WDS-query.scw
PDB file :
Tito_Scwrl_2WDS.pdb
: