Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPEVATWLEV-PLP-----PGVLRWQQDHGRHLIDDALKVVEQASLRAGPPTVHSEIVPAAAVPTLVDMSKDAVLMVVGCLGSGRW-PGRLLGSVSSGLLRHAHCPVVIIHDEDSVMPHPQQAPVLVGVDGSSASELATAIAFDEASRRNVDLVALHAWSDVDVSEWPGIDWPATQSMAEQVLAERLAGWQERYPNVAITRVVVRDQPARQLVQRSEEAQLVVVGSRGRGGYAGMLVGSVGETVAQLARTPVIVARESLT |
3AB8 Chain:A ((1-268)) | -------MRILLATDGSPQARGAEALAEWLAYKLSAPLTVLFVVDTRLARIPELL--PVPVLRTELERALALRGEAVLERVRQSAL-----AAGVAVEAVLEEGVPHEAILRRARAADLLVLGRSGEAHGDGFGGLGSTADRVLRASPVPVLLAPGEP-----VELEGALLGYDASESAVRALHALAPLARALGLGVRVVSVHEDPARAE-------AWAL----EAEAY---LRD--HGVEASALVLGGDAADHLLRLQGPGDLLALGAP----VRRLVFGSTAERVIRNAQGPVLTAR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175281 for 2192 contacts (-80.0/contact) +
2D Compatibility (PS) -28663 + (NN) -18536 + (LL) 1460
1D Compatibility (HY) -6800 + (ID) 2800
Total energy: -230620.0 ( -105.21 by residue)
QMean score : 0.513
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