Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLIAARRYSATMHGSASEACGSVDHLVDRHPTVSPVRLIAQLRPPPTFAEVSFATYRPDPVEPTQAAAVVACQDFCRQAVERRAGRKKWFGKRDVLPGVGLYLDGGFGVGKTHLLASAYYQLPGTGPDAPTCPKAFATFGELTQLAGVF-GFADCIDLLANYTALCIDEFELDDPGN---TTLISRLLSALVERGVSVAATSNTLPEQLGEGRFA---AQDFLREINTLASIFTTVRIEGPDYRHRDLPPAPAPLSDEEVAARAARVEGATLDDFDALCAHLATMHPSRYLTLIEGVTAVFLTGVHGIDDQNVALRLVALVDRLYDAGIPVVASGAKLDTIFSEEMLAGGYRKKYLRATSRLLALTAGVIQAREP |
| 4M4W Chain:J ((115-309)) | -------------------------------------SLMKSMYIQQDLLGATFQQVDISD--PSRLAMFQHVTDFLKSYNET-------------GKGKGLYLYGKFGVGKTFMLAAIANELAEK-----EYSSMIVYVPEFVRELKNSQTLEEKLNMVKTTPVLMLDDIGAES---WVRDEVIGTVLQHRMSQQLPTFFSSNFSPDELKHH-FTYSQEVKAARLMERILYLAAPIRLDGENRR----------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99094 for 1275 contacts (-77.7/contact) +
2D Compatibility (PS) -17885 + (NN) -3790 + (LL) 12504
1D Compatibility (HY) -9200 + (ID) 1800
Total energy: -119265.0 ( -93.54 by residue)
QMean score : 0.184
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