Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDRPLEGKVAFITGAARGLGRAHAVRLAADGANIIAVDICEQIAS----VPYPLSTADDLAATVELVEDAGGGIVARQGDVRDRASLSVALQAGLDEFGRLDIVVANAGI-----AMMQAGDDGWRDVIDVNLTGVFHTVQVAIPTLIEQGTGGSIVLISSAAGLVGIGSSDPGSLGYAAAKHGVVGLMRAYANHLAPQNIRVNSVHPCGVDTPMINNE-FFQQWLTTADMDAPHNLG------NALPVELVQPTDIANAVAWLASEEARYVTGVTLPVDAGFVNKR |
| 3UVE Chain:C ((9-286)) | -----VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL----KAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UVE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198753 for 2298 contacts (-86.5/contact) +
2D Compatibility (PS) -27300 + (NN) -4510 + (LL) 448
1D Compatibility (HY) -24000 + (ID) 6800
Total energy: -260915.0 ( -113.54 by residue)
QMean score : 0.546
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