Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRVGVLGAKGKVGATMVRAV----------AAAD--DLTLSAELDAGDPLSLLTDG------------NTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFTAERFQQVESWLVAK--PNTSVLIAPNFAIGAVLSMHFAKQAARFFDSA---EVIELHHPHKADAPSGTAARTAKLIAEA-RKGLPPNPDATSTSLPGARGADVDGIPVHAVRLAGLVAHQEVLFGTEGETLTIRHDSLDRTSFVPGVLLAVRRIAERPGLTVGLEPLLDLH |
| 4YWJ Chain:B ((11-272)) | -RIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGA-DAGELAGLGRIGVPLSGDLGKVCEEFDVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSAD-----EKLLLAEAAKDIPIVFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDLQEVAVYGREGQTGARARETIGFAT--VRAGDVVGDHTVLFAAEGERVEITHKASSRMTFARG---AVRAALWLEGKENGLYDMQDV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94165 for 1748 contacts (-53.9/contact) +
2D Compatibility (PS) -25637 + (NN) -14029 + (LL) 1824
1D Compatibility (HY) -13200 + (ID) 4500
Total energy: -149707.0 ( -85.64 by residue)
QMean score : 0.556
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