Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVGTLVASVLPATVFEDLAYAELYSDPPGLTPLPEEAPLIARSVAKRRNEFITVRHCARIALDQLGVPPAPILKGDKGEPCWPDGMVGSLTHCAGYRGAVVGRRDAVRSVGIDAEPHDVLP------NGVLDAISLPAERADMPRTM--PAALHWDRILFCAKEATYKAWFPLTKRWLGFEDAHITFETDSTGWTGRFVSRILIDGSTLSGPPLTTLRGRWSVERGLVLTAIVL |
5CXD Chain:A ((5-116)) | -----------------------------------------------------------------------------------------------------------IHGIGVDLIEIDRIQALYSKQPKLVERILTKNEQHKFNNFTHEQRKIEFLAGRFATKEAFSKALGTG---HVAFNDIDCYNDEL-----GKPKIDY----------EGFIVHVSISHTEHYAMSQVV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45384 for 695 contacts (-65.3/contact) +
2D Compatibility (PS) -10669 + (NN) -3461 + (LL) 6496
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -56218.0 ( -80.89 by residue)
QMean score : 0.271
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