Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVKNTIAATSFAAAGLAALAVAVSPPAAAGDLVGPGCAEYAAANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNS-GQ-YTVFAPTNAAFSKLPASTID----ELK-TNSSLLTSILTYHVVAG--QTSPANVV--------GTRQTLQGASVTVTGQ--GNSLKV----GNADVVCGGVSTANATVYMIDSVLMPPA
1O70 Chain:A ((157-311))
-------------------------------------------------------PYTTVLGKLESDPMMSDTYKMGKF-----SHFNDQLNNTQRRFTYFVPRDKGWQKTELDYPSAHKKLFMADFSYHSKSILERHLAISDKEYTMKDLVKFSQESGSVILPTF-RDSLSIRVEEEAGRYVIIWNYKKINVYRPDVECTNGIIHVIDYPLLEEK
General information:
TITO was launched using:
RESULT:
Template:
1O70.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84960 for 1006 contacts (-84.5/contact) +
2D Compatibility (PS) -14147 + (NN) -3533 + (LL) 3608
1D Compatibility (HY) -5200 + (ID) 1150
Total energy: -105382.0 ( -104.75 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1O70.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O70-query.scw
PDB file :
Tito_Scwrl_1O70.pdb
: