Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRPLHAFEVVATRHLAPHMVRVVLGGSGFDTFVPSDFTDSYIKLVFVDDDVDVGRLPRPLTLDSFADLPTAKRPPVRTMTVRHVDAAAREIAVDIVLHGEHGVAGPWAAGAQRGQPIYLM-GPGGAYAPDPA--ADWHLLAGDESAIPAIAAALEALPP---DAIGRAFIEVAGPDDEIG---LTA----PD--------AVEVNWVYRGGRADLVPEDRAGDHAPLIEAVTTT----------AWLPGQVHVFIHGEAQAVMHNLRPYVRNERGVDAKW--------ASSISGYWRRGRTEEMFRKWKKELAEAEAGTH |
| 4B4D Chain:A ((7-260)) | ----AFGAETVLEVRHWTDAYFSFTTTRDAGFRFEN----GQFVMIGLETET----------------------RPLLRAYSIASANW-EEHLEFFSIKVP-DGPLTSRLQHIQPGDKVLVGKKPTGTLLISDLHPGRNLYLLGTGTGLAPWLSIIKDPETYERFDKVILTQGVRFVQDLAYRDYFERELPQHEFLGDLLREKLLYYPAVTRETFA-NQ----G----RLTELMADGRMQQTLGLPTLDPANDRFMICGSPQ-MLADLRSLLDS-RGFQ-TSPRIGTPGHYVFERAFV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B4D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127327 for 1743 contacts (-73.1/contact) +
2D Compatibility (PS) -23424 + (NN) -8995 + (LL) 4468
1D Compatibility (HY) -7600 + (ID) 1300
Total energy: -164178.0 ( -94.19 by residue)
QMean score : 0.416
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