Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLV-SNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSP------------------------EDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYGLRSTAPPS--D------GRWWNTISSAPDLIRYYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYPQRFGIPDGLY-AEPVAVKQGWMCCIGSSWMHLSTGVIG-PER-RYIMVIESLQPADDATARATITQAVRTMFPNGRI |
| 4ZJ1 Chain:A ((27-264)) | -------------------------------------------------------------------------TL-VKVKDAEDQ---LGARVGYIELDLNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVRELCSAAITMSDNTAANLLLTTIGGPKELTAFLHNMGDHVTRLDRWEPELNEAIPNDERDTTMPVAMATTLRKLLTGE-LLTLASRQQLIDWMEAD------K-A-GPLLRSALPAGWFIADKSGAGERG----SRGIIAALGPDGKPSRIVVIYTTGS----------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4ZJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -96215 for 1643 contacts (-58.6/contact) +
2D Compatibility (PS) -22477 + (NN) -12404 + (LL) 7472
1D Compatibility (HY) -4000 + (ID) 1900
Total energy: -129524.0 ( -78.83 by residue)
QMean score : 0.519
|
|
|