Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
4C3K Chain:D ((1-112))
MKKIEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGR--------------VEFLQKLKLEIVVEDAQVDTVIDKIVAAARTGEIGDGKIFVSPVDQTIRIRTGEKNADAI
General information:
TITO was launched using:
RESULT:
Template:
4C3K.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67205 for 651 contacts (-103.2/contact) +
2D Compatibility (PS) -10675 + (NN) -2509 + (LL) 736
1D Compatibility (HY) -12800 + (ID) 2900
Total energy: -95353.0 ( -146.47 by residue)
QMean score : 0.575
(partial model without unconserved sides chains):
PDB file :
Tito_4C3K.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C3K-query.scw
PDB file :
Tito_Scwrl_4C3K.pdb
: