Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLAIIAGDGIGPEVTAEAVKVLDAVVP----GVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPS---VPSGVLERGLLLRLRFELDHHINLRPARLYPGVA--SPLSGN--PGIDFVVVREGTEGPYTGNGGAIRVGTPNEVATEVSVNTAF----GVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVGECYPDVEVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAPDIAGQGIADPTAAIMSVALLLSH-LGEHDAAARVDRAVEAHLATRGSERLATSDVGERIAAAL |
2Y41 Chain:B ((4-322)) | MKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDGLPRKIRPETGLLSLRKSQDLFANLRPAKVFPGLERLSPLKEEIARGVDVLIVRELT--------GGIYFGEPRGMSEAEAWNTERYSKPEVERVARVAFEAARKRRKHVVSVDKANVLE-VGEFWRKTVEEVGRGYPDVALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLG--RGTP-VFEPVHGSAPDIAGKGIANPTAAILSAAMMLEHAFGLVELARKVEDAVAKAL--------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y41.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199947 for 2626 contacts (-76.1/contact) +
2D Compatibility (PS) -33237 + (NN) -18387 + (LL) 1416
1D Compatibility (HY) -26400 + (ID) 7100
Total energy: -283655.0 ( -108.02 by residue)
QMean score : 0.506
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