Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYLDHAATTPMHPAAIEAMA-AVQRTIGNASSLHTSGRSARRRIEEARELIADKLGARPSEVIFTAGGTESDNLAVKGIYWARRDA----EPHRRRIVTTEVEHHAVLDSVNWLVEHEGAHVTWLP-TAADGSVSATALREALQSHDDVALVSVMWANNEVGTILPIAEMS--VVAME-----FGVP---MHSDAIQAVGQLPLDFGASGLSAMSVAGHKFGGPPGVGALLLR---RDVTCVPLMHGGGQERDIRSGTPDVASAVGMATAAQIAVDGLEENSARLRLLRDRLVEGVLAEIDDVCLNGADDP--MRLAGNAHFTFRGCEGDALLMLLDANGIECSTGSACTAGVA-QPSHVLIAMGVDAASARGSLRLSLGHTSVEADVDAALEVLPGAVARARRAALAAAGASR |
| 3A9X Chain:B ((21-425)) | --YMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRP--TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYG-PRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAV--------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3A9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -179090 for 3305 contacts (-54.2/contact) +
2D Compatibility (PS) -41672 + (NN) -25655 + (LL) 1672
1D Compatibility (HY) -24000 + (ID) 6500
Total energy: -275245.0 ( -83.28 by residue)
QMean score : 0.451
|
|
|