Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTFSHPHFFRSVLRWLQVGYPEGVPGPDRVALLSLLRSTPLTEEQIGEVVRHFTENGSPAVADRVIDRDEIAEFISEVTHHDAGPENIQRVAGILAAAGWPLAGVDVGESESGSDRAPASQG
2DSJ Chain:A ((15-70))
-----------------------------------------KHRREDLEAFLLGYLR--------DEVPDYQVSAWLMAAFLRGLDPEETLWLTETMARSGKVLD-------------------
General information:
TITO was launched using:
RESULT:
Template:
2DSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18966 for 296 contacts (-64.1/contact) +
2D Compatibility (PS) -5919 + (NN) -1401 + (LL) 2480
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -26106.0 ( -88.20 by residue)
QMean score : 0.531
(partial model without unconserved sides chains):
PDB file :
Tito_2DSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DSJ-query.scw
PDB file :
Tito_Scwrl_2DSJ.pdb
: