Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANEPAIGAIDRLQRSSRDVTTLPAVISRWLSSVLPG-G---AAPEVTVESGVDSTGMSSETIILTARWQQD-GRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEG--IG-------RSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDF------QPVAVLDWEMVALGPRELDVAWMIFAHRVFQELAGL-------ATLPGLPEVMREDDVRATYQALTGV---------------E-LGDLHWFYVYSGVMWACVFMRTGARRVHFGEIEKPDDVESLFYHAGLMKHLLGEEH |
| 5FTG Chain:A ((8-349)) | ----------------------TRRRAYLWCKEFLPGAWRGLREDEFHIS--VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG----------EAMVLESVMFAILAE-RSL-GPKLYGIFP-------QGRLEQFIPSRRLDTEE-----------LS---LPDISAEIAEKMATFHGMKMPFNKEP---------KWLFGTMEKYLKEVLRIKFTEESRIKKLHKLLSYNLPLELENLRSLLEST--PSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSYNYRGFDIGNHFCEWMYDYSYEKYPFFRANIRKYPTKK---QQLHFISSYLPAFQNDFENLSTEEKSIIKEEMLLEVNRFALASHFLWGLWSIVQA--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5FTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -171010 for 1981 contacts (-86.3/contact) +
2D Compatibility (PS) -28981 + (NN) -7593 + (LL) 5928
1D Compatibility (HY) -11200 + (ID) 2050
Total energy: -214906.0 ( -108.48 by residue)
QMean score : 0.365
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