Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTWPAPTAPTPVRATVTVPGSKSQTNRALVLAALAAAQGRGASTISGALRSRDTELMLDALQTLGLRVDGVG--SELTVSGRIE---PGPGARVDCGLAGTVLRFVPPLAALGSVPVTFDGDQQARGRPIAPLLDALRELGVAVDG--TGLPFRVRGNGSLAGGTVAIDASASSQFVSGLLLSAASFTDGLTVQHTGSSLPSAPHIAMTAAMLRQAGVDIDDSTPNRWQVRPGP-VAARRWDIEPDLTNAVAFLSAAVVSGGT-VRITGWPRVSVQPADHILAILRQLNAVVIHADS---------SLEVRGPTGYDGFDVDLRA---VGELTPSVAALAALASPGSVSRLSGIAHLRGHETDRLAALSTEINRLGGTCRETPDGLVITATPLRPGIWRAYADHRMAMAGAIIGLRV-AGVEVDDIAATTKTLPEFPRLWAEMVGPGQGWGYPQPRSGQRARRATGQGSGG |
3SLH Chain:A ((5-436)) | ---DYQTIPSQGLSGEICVPGDKSISHRAVLLAAIA----EGQTQVDGFLMGADNLAMVSALQQMGASIQVIEDENILVVEGVGMTGLQAPPEALDCGNSGTAIRLLSGLLAGQPFNTVLTGDSSLQRRPMKRIIDPLTLMGAKIDSTGNVPPLKIYGNPRLTGIHYQLPM-ASAQVKSCLLLAGLYARGKTCITE----PA--PSRDHTERLLKHFHYTLQKD-KQSICVSGGGKLKANDISIPGDISSAAFFIVAATITPGSAIRLCRVGVNPT--RLGVINLLKMMGADIEVTHYTEKNEEPTADITVRH-ARLKGIDIPPDQVPLTIDEFPVLLIAAAVAQ--GKTVLRDAAELRVKETDRIAAMVDGLQKLGIAAESLPDGVIIQGGTLEGGEVNSYDDHRIAMAFAVAGTLAKGPVRIRNCDNVKTSFPNFVELANEVGMNVKGVR-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SLH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298772 for 3889 contacts (-76.8/contact) +
2D Compatibility (PS) -44439 + (NN) -21342 + (LL) 48
1D Compatibility (HY) -23200 + (ID) 5450
Total energy: -393155.0 ( -101.09 by residue)
QMean score : 0.432
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