Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRRAP---HLGFHIDFDDAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASPRILPSAQPDGERILTWRQLYDLDALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTD----GRTVEGSHALMTIGSVPNTSGLGLERVGIQLGRGNYLTVDRVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAMYHALGEGVSPIRLRTVAATVFTRPEIAAVGVPQSVIDAGSVAARTIMLPLRTNARAKMSEMRHGFVKIFCRRSTGVVIGGVVVAPIASELILPIAVAVQNRITVNELAQTLAVYPSLSGSITEAARRLMAHDDLDCTAAQDAAEQLALVPHHLPTSN |
| 1LVL Chain:A ((4-455)) | IQTTLLIIGGGPGGYVAAIRAGQL---GIPTVLVEGQALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGIS--VASPRLDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLDGK------QVEV-----DGQRIQCEHLLLATGSSSVELPMLPLG-GPVISSTEALAPKALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENG----CLLANDGKGGQLRLEADRVLVAVGRRPRTKGFNLECLDLKMN-GAAIAIDERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEIIAGKA-RRFEPAAIAAVCFTDPEVVVVGKTPEQASQQGLDCIVAQFPFAANGRAMSLESKSGFVRVVARRDNHLILGWQAVGVAVSELSTAFAQSLEMGACLEDVAGTIHAHPTLGEAVQEAALRALGHA------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335689 for 3886 contacts (-86.4/contact) +
2D Compatibility (PS) -48005 + (NN) -11800 + (LL) 2084
1D Compatibility (HY) -18400 + (ID) 5850
Total energy: -417660.0 ( -107.48 by residue)
QMean score : 0.476
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