Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTATEELTFESTSRFAEVDVDGPLKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEHGQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKNLITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMW--------REVYRLRQPVLLIWGREDRVNPLDGALVALKTIPRAQLHVFGQCGHWVQVEKFDEFNKLTIEFLGGGR |
1UKA Chain:A ((18-270)) | --------------------------NYHDVGEG--QPVILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRF-----DVTEGLNAVWGYT--PSIENMRNLLDIFAYDRSLVTDELARLRYEASIQP-------GFQESFSSMFPEPRQRWIDALASSDEDIKTLPNETLIIHGREDQVVPLSSSLRLGELIDRAQLHVFGRCGHWTQIEQTDRFNRLVVEFF---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -165684 for 2139 contacts (-77.5/contact) +
2D Compatibility (PS) -26738 + (NN) -17521 + (LL) 2536
1D Compatibility (HY) -17200 + (ID) 4650
Total energy: -229257.0 ( -107.18 by residue)
QMean score : 0.519
|
|
|