Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLSGIQQNTLMDNDPLAHGYYVADLLVALAVVVLMLRARRTRPELARMLLLGTLIGLVWELPVFGLSAWTNTPIIEWATPLPLPTVVFLLAHSVWDGPLLTMGWLLARALTGEPAGALGLTVQVLWGQLTALAVELSAILAGTWSYVDDLWFNPVM---FWFRGHPVTAAMQLTWLLAPLCFAALVRRLALTAR |
4N33 Chain:B ((65-98)) | ----------------------------------------------------------------------------------------------------------------------------------------KAGMEGDWSWVDDTPFNKVQSARFWIPGEPNNAG------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5182 for 104 contacts (-49.8/contact) +
2D Compatibility (PS) -3013 + (NN) 281 + (LL) 14912
1D Compatibility (HY) -1600 + (ID) 750
Total energy: 4648.0 ( 44.69 by residue)
QMean score : -0.240
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