Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MTAPHKVAFPARCAVNICYDKHLCSQVF-PAGIPVEGFFEGMVELFDADLKRKGFDGVALPAGSYELHKINGVRLDINKSLDELGVQDGDTLVLVPRVAGESFEPQYESLSTGLAAMGKWLGRDGGDRMFAPVTSLTAAHTAMAIIAMAVGVVLALTLRTRTITDSPVPAAMAGGIGVLLVIGALVVWWGWRERRDLFSGFGWLAVVLLAVAAACAPPGALGAAHALIGLVVVVLGAITIGVATRKRWQTAVVTAVVTVCGILAAVAAVRMFRPVSMQVLAICVLVGLLVLIRMTPTVALWVARVRPPHFGSITGRDLFARRAGMPVDTVAPVSEADADDEDNELTDITARGTAIAASARLVNAV-QVGMCVGVSLVLPAAVWGVLTPRQPWAWLALLVAGLT-VGLFITQGRGFAAKYQA----VALVCGASAAVCAGVLKYALDTPKGVQTGLLWPAIFVAAFAALGLAVALVVPA---------TRFRPIIR-----LTVEWLEVLAMIALLPAAAALGGLFAWLRH |
| 3CMQ Chain:A ((11-415)) | PGSVVELLGKSYPQDDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRF------GTPLFSVYDNLSPVVTTWQNFDSLLIPADH----PSRKKGDNY---YLNRTHML----------------------------------------------RAHTSAHQWDLLHAGLDAFLVVGDVY-------RRDQIDSQHY------------------PIFHQLEAVRLFSKHELF---AGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQ--TLTRLMAHLFGDELEIRWVDCYFPFTHPSFEMEINF----------------------HGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLG----------------LERLAMILYDIPDIRLFWCEDERFLKQFCVSNINQKVKFQPLSKYPAVINDISFWLPSENYAENDFYDLVRTIGGDLVEKVDLIDKFVHPKTHKTSHCYRITYRHMERTLSQREVRHIHQALQEAAVQLLGVEGRF--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -318094 for 2959 contacts (-107.5/contact) +
2D Compatibility (PS) -40477 + (NN) -5575 + (LL) 10976
1D Compatibility (HY) -5600 + (ID) 2600
Total energy: -361370.0 ( -122.13 by residue)
QMean score : 0.230
|
|
|