Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRLKKTLHLSSLSLASLALSSAALAAAPVMLDQGKEWTESHRQDFYSRDQGSQVMPLPWLKALRQPDGTPFLADSLARYGYLPNPKAPAEGLPVGFTVAGTGARQMVGMTCSACHTRQIEVKGTAYRIDGGPAIVDFQAFLADLDRAVGPLTSDDAAFDAFAKPILGANPPPGARDALLAAVKEWYEPYHTLIERALPKDTWGPARLDAVSMIFNRLTGLDIGTAPPYLIPDNIKAADAPVRYPFLWNAARQNKTQWPGFAANGND--LLGLARNVGEVYGVF-ATFH-PQKSKFHLLGMDYLKIN---SANFHG-LGKLEDLIKKIGPPKWPWA--------VDKHLARKGALIFARKTDEGGCVECHGIRIKDLVLWDTPLRDVGSDSRQHAILDGQVQTGVMEGARMPFGQPLKATDGAFDVLAVAVAGSILQHFVPILGEKHDAKAAAVKPESVMTDETRQLLTAFQKPVRTQADPYPYESRVLQGIWAAAPYLHNGSVPTLEELLKPAAERVESFPVGSAYDVDKVGLAAQQTQFGSYVLKTTGCEQRDSGNSRCGHEYGTSLSAEEKRALLEYLKVL |
| 1ZZH Chain:A ((79-302)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPRNAPTALNAVFNVAQFWDGRAPDLAAQA---------M-NNTPENLVATVQSMPGYVEAFAKAFPGQKDPISFDNFALAVEAFEATLITPNSKFDQWLMGADGAMSADEKAGLKLFID----TGCAACHNGINI--GG--NGYYPFGVVEKP-----------------------------------------------------------GRF-----------AVTAT----A--DDEYVFRAGPLRNIALTAPYFHSGKVWDLREAVS--------VMAN-----------------------------SQL---------GATLDDTQVDQITAFLGTL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZZH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -35109 for 1338 contacts (-26.2/contact) +
2D Compatibility (PS) -19992 + (NN) -11991 + (LL) 22612
1D Compatibility (HY) 400 + (ID) 1800
Total energy: -45880.0 ( -34.29 by residue)
QMean score : 0.231
|
|
|