Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MISSFRAQCAARVVREGGVIAYPTEAVWGLGCDPWNEDAVY-RLLALKARPVEKGLIVVAANIHQLDFLLED--LPDVWLDRLAGTWPGPNTWLVPHQERLPEWVTGVHDSVAVRVTDHPLVQELCHLTG-PLISTSANPAGRPAARTRLRVEQYFHDELDAILGGALGGRRNPSLIRDLVTGQVIRPA
1HRU Chain:A ((3-188))
NNLQRDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAV-MRLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDVQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFP-VVPGETGGRLNPSEIRDALTGELFR--
General information:
TITO was launched using:
RESULT:
Template:
1HRU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121977 for 1444 contacts (-84.5/contact) +
2D Compatibility (PS) -19664 + (NN) -12724 + (LL) 240
1D Compatibility (HY) -14000 + (ID) 4600
Total energy: -172725.0 ( -119.62 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1HRU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HRU-query.scw
PDB file :
Tito_Scwrl_1HRU.pdb
: