Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------MTDRIAAVKTYLLDLQD--------------RICAALEAEDGKARFAEDAWERP---------AGGGGRTRVIGDGALIEKGGVNFSHVF------GDSLPPSASAHRPELAGR---GFQALGVSLVIHPENPHVPTSHANVRFFCAEKEGEEPVWWFGGGFDLTPYYAHEEDCVHWHRVARDACAPFGADVYPRYKEWCDRYFHLKHRNEPRGIGGLFFDDLNQW--DFDTCFAFIRAIGDAYIDAYLPIVQRRKHTPFDERQREFQAYRRGRYVEFNLVFDRGT-------------LFGLQSGGRTESILMSLPPQVRWG----YDWKPEPGSEEARLTEY-----FLADRDWLAGQP------------- |
| 4FDO Chain:A ((27-481)) | TTTATRLTGWGRTAPSVANVLRTPDAEMIVKAVARVAESGGGRGAIARGLGRSYGDNAQNGGGLVIDMTPLNTIHSIDADTKLVDIDAGVNLDQLMKAALPFGLWVPVLPGTRQVTVGGAIACDIHGKNHHSAGSFGNHVRSMDLLTADGEIRHLTPTGEDAELFWATVGGNGLTGIIMRATIEMTPTSTAYFIADGDVTASLDETIALHSDGSEARYTYSSAWFDAISAPPKLGRAAVSRGRLATVEQLPAKLRSEPLKFDRKSGTYRGKVQN-LTQFYHPLDMFGEWNRAYGPAGFLQYQFVIPTEAVDEFKKIIGVIQASGHYSFLNVFKLFGPRNQAPLSFPIPGWNICVDFPIKDGLGKFVSELDRRVLEFGGRLYTAKDSRTTAETFHAMYPRVDEWISVRRKVDPLRVFASDMARRLELL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FDO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -29638 for 2157 contacts (-13.7/contact) +
2D Compatibility (PS) -31969 + (NN) -2381 + (LL) -76
1D Compatibility (HY) 400 + (ID) 2250
Total energy: -65914.0 ( -30.56 by residue)
QMean score : 0.123
|
|
|