Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHIQSSQQNPSFVAELSQAVAGRLGQVEARQVATPREAQQLAQRQEAPKGEGLLSRLGAALARPFVAIIEWLGKLLGSRAHAATQAPLSRQDAPPAASLSAAEIKQMMLQKALPLTLGGLGKASELATLTAERLAKDHTRLASGDGALRSLATALVGIRDGSRIEASRTQAARLLEQSVGGIALQQWGTAGGAASQHVLSASPEQLREIAVQLHAVMDKVALLRHAVESEVKGEPVDKALADGLVEHFGLEAEQYLGEHPDGPYSDAEVMALGLYTNGEYQHLNRSLRQGREL-DAGQALIDRGMSAAFEKSGPAEQVVKTFRGTQGRD-------------AFEAVKEGQVGHDAGYLSTSRDPGVARSFAGQGTI---TTLFGRSGIDVSEISIEGDEQEILYDKGTDMRVLLSAKD-GQGVTRRVLEEATLGERSGHGEGLLDALDLATGTDRSGKPQEQDLRLRMRGLDLA |
| 1QS1 Chain:A ((286-453)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EWAKDLTDSQREALDGYARQDYKEINNYLRNQGGSGNEKLDAQIKNISDALGKKPIPE-NITVYRWCGMPEFGYQISDPLPSLKDFEEQFLNTIKEDKGYMSTSLSSERLAAFGSRKIILRLQVPKGSTGAYLSAIGGFASEKEILLDKDSKYHIDKVTEVIIKGVKRYVVDATLLT---------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QS1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13856 for 985 contacts (14.1/contact) +
2D Compatibility (PS) -16458 + (NN) -12593 + (LL) 22176
1D Compatibility (HY) -3600 + (ID) 1800
Total energy: 1581.0 ( 1.61 by residue)
QMean score : 0.285
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