Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------MDLRPSHVHVFPPSRDLPAATSPHRETLLRSGCAWNGSLYL-GYPLGQPQLTVQRLSLAAHERLDWQVH------PMPSALYVLK-----GELRLETRDGAQSTRVLEGEAAGCLMNIIHRLIAGAEPVEALLFHAGVEGMPVGLGERGEM--PDA-------------------------------------------------------- |
| 4F0D Chain:A ((2-271)) | MGWAAAREAAGRDMLAADLRCSLFASALQSYKRDSVLRPFPASYARGDCKDFEALLADASKLPNLKELLQSSGDNHKRAWDLVSWILSSKVLTIHSAGKAEFEKIQKLTGAPHTPVPAPDFLFEIEYFDPANAKFYETKGERDLIYAFHGSRLENFHSIIHN---------------GLHCHKTSLFGEGTYLTSDLSLALIYSPHGHGWQHSLLGPILSCVAVCEVIDHPDKYFVVTNNQLLRVKYLLVYSQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10118 for 575 contacts (-17.6/contact) +
2D Compatibility (PS) -13385 + (NN) -2710 + (LL) 1572
1D Compatibility (HY) -1200 + (ID) 1200
Total energy: -27041.0 ( -47.03 by residue)
QMean score : 0.103
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