Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDRKTLDDTSKFLSYVLRHQPEAIGLTLDGEGW------ADIDALIAGAARDG-----RALDRMLLGAVVENNDKKRFALSADGQRIRAVQGHSHAAV-------------AIAYAPAVPPAVLYHGTASRFLDSIRERGLVP-------GSRHHVHLSARRATALEVGRRYGSPVLLEIDARDMHLAGHLFHQAENGVWLTERVPV---------RFIREA---- |
| 2YVS Chain:A ((1-219)) | ---MEVHAADQYLVAPGEADLLEVHARLAGTGLFPPFPPVELPGGVGGLVARGGFAQTFFFPAEVLGLTFRTPKGR--RVRAGGVVVKNVQGYDLVRLFVGSFGLLGRAEEVVLRLRPGRAQAFLRRPFSGSFPRLVPTPRFLFALEDEEGPWLYAYHFGHPKEVERFREAFGGEEARPLDLRPRFPRG--LGLGEGPLWDLRFRYQDGGASPPPPPAFLRLARVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YVS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48373 for 1129 contacts (-42.8/contact) +
2D Compatibility (PS) -18058 + (NN) 2718 + (LL) 684
1D Compatibility (HY) -2000 + (ID) 1050
Total energy: -66079.0 ( -58.53 by residue)
QMean score : 0.102
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