Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLSIYQASIPTFLRTLGNLSAILKKAAAHAEAKNIDPRIFIDARLAPDMFPLARQVQIASDAAKGAGAR----LAGLEVPSYADTETTFDELQARIARTVEFLEGI-----REEQLDGAEERNVTLKVRGQEISFNGRDFLFGFALPNFFFHVTTAYAILRHNGVELGKMDFLGGA
3DI5 Chain:A ((27-149))
-----------------------------------LTDES-LSQEIAPGHWTLGRVAWHIVTAIPVILSGTGLKFEGETKD-Y-PVPTSAKTIADGYRKVNTAFVEALQSEWTDKDL----TTIND-FF-GR--PMPNSIFL-MTLINHQNHHRGQMTVLMRQAGLTVPGVY-----
General information:
TITO was launched using:
RESULT:
Template:
3DI5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -30269 for 748 contacts (-40.5/contact) +
2D Compatibility (PS) -12011 + (NN) -4000 + (LL) 4244
1D Compatibility (HY) -1200 + (ID) 750
Total energy: -43986.0 ( -58.80 by residue)
QMean score : 0.336
(partial model without unconserved sides chains):
PDB file :
Tito_3DI5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DI5-query.scw
PDB file :
Tito_Scwrl_3DI5.pdb
: