Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MRAGLLLSLAWADYRGEARLSLC----AIFALAAVITPL---LVLFGLKYGLVSTLTERLERA----------------------PSVREIIPVGG------ARYRAEDIAALAARADVAFAV----------PRTRQIAATADLSGGGETALSVEMIP----------SAAGDPLLAGLPQPDRPTRVVLSHG---------------AAEKLGAQPGERI--VARIGRRMDGQAQSQRLELEVLAVLP------QERFARDA----------------------------LFAPLALLEAAEDYRDGRAVAAYGWPGKAGETPRARIYPGFRLYARDLDAV-EGLRRHFVASGVEVATQ-------AEAIAQVRSLSRNLGLVFWIVAALAIGGAFAAIAASSLAAVERKRRALA----VLRLLGFPTAALVGFVMLLAL----FSAVFGLFL---------AGLLYAATAGALNHLFDNQS-GEFVCRLLPSHYLTALL------ATLLCSVLAAASGGWRAARIEAAEGLRDV-- |
| 1D2M Chain:A ((2-583)) | TFRYRGPSPKGDQPKAIAGLVEALRDGERFVTLLGATGTGKTVTMAKVIEALGRPALVLAPNKILAAQLAAEFRELFPENAVEYFISYYDYYQPEAYVPGKDLYIEKDASINPEIERLRHSTTRSLLTRRDVIVVASVSAIYGLGDPREYRARNLVVREVLLERLLELGYQRNDIDLSPGRFRAKGEVLEIFPAYETEPIRVELGFVLFPATHYLSPEGLEEILKEIEKELWERVRYFEERGEVLYAQRLKERTLYDLEMLRVMGTCPGVENYARYFTGKAPGEPPYTLLDYFPEDFLVFLDESHVTVPQLQGMYRGDYARKKTLVDYGFRLPSALDNRPLRFEEFLERVSQVVFVSATPGPFELAHSGRVVEQIIRPTGLLDPLVRVKPTENQILDLMEGIRERAARGERTLVTVLTVRMAEELTSFLVEHGIRARYLHHELDAFKRQALIRDLRLGHYDCLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNARGEVWLYADRVSEAMQRAIEETNRRRALQEAYNLEHGITPETV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191696 for 2651 contacts (-72.3/contact) +
2D Compatibility (PS) -43484 + (NN) -17736 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 3350
Total energy: -259866.0 ( -98.03 by residue)
QMean score : 0.162
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