Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MDAQAAARLGDEIAHGFGVAAMVAGAVAG-----ALIGAAVVAATAATGGLAAVILAGSIAAGGLSMFQIVK--GLTTIFELPEPTTGVLIRGSF-----NVYVNSRNAMRAGDDVSATCSGLPLNHPL----WPFPVLIAEGSATVYI-----NGKPAARLQSKMVCGAHIKTGSQNTFIGG----PTE-------RVAFVLDLEEWLHTGLEALGLAALAGGLLLAAMAGV-----------AALVGVVAIGGLMMGGMALLGDLGDRL------GPGYRDLFQGVAGMALLGFG-PKLAGRRPAAVTSETAQRRAYLNNKFGRSGNLDHDINYRGNRETAAKFFKSKDIDPADAESYMNGLDFNHPVRVETLAPGKNLWQYQSPGAPQGNWYTLSPRVQPTELGINPMGTNRAANTIEPKVLNSYRTTQKVEVLRSTAAPTDDFWSVKGQSYPAKGGAQQLFSNEKGSFGLLPREGS-------- |
| 5DA0 Chain:A ((14-484)) | QREWFANPRKDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYASFIIALITAFLGGRPGMISAATGAMALLMTGLVKDHGIQYLFAATVLTGVLQVVFGWAKLARYLKFVPRSVMVGFVNALAILIFMAQLPQFVGANWQMYAMVAAGLAIIYLLPLVFKAMPSALVAIVVLTVVAVVTGADVKTVGDMGTLPTALPHFQFPQVPLTFETLAIIFPVALTLSLVGLLESLLTAQLIDERTDTTSDKNVESRGQGVANIVTGFFGGMAGCAMIGQSMINVTSGGRGRLSTFVAGAFLMVLILALQPLLVQIPMAALVAVMMVVAISTFDWGSLRF--PKGETVVMLATVAVTVFTHDLSLGVLIGVVLSALFFARKV-------SQLSQVTPVDEVDG---TRTYRVRGQLFFVSTHDFLHQFDFTHPA--------RRVVIDLSDA----HFWD--GSAVGALDKVMLKFMRQGTSVELRGLNAASATLVERL |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97166 for 3345 contacts (-29.0/contact) +
2D Compatibility (PS) -42347 + (NN) -9006 + (LL) 1416
1D Compatibility (HY) -16000 + (ID) 3900
Total energy: -167003.0 ( -49.93 by residue)
QMean score : 0.191
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