Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQALSIVASGMVSAVGLSAPASCAAIRCALDNFQETRFIDQGGEWL-LAASVPL--------EQPWRGRAKLLKMAARAIDEALRGQPDLDC----TELPLLLCVAEGDRPG--------------------RCAGLDESFLRDLEGELGRRFHPSSALIARGRVGGAVALLNARKLI-QGGCRQVLVAGVDSFVSGPTLAAYEARERLLT-----------SQNSNGFIPGEGAAAVLVAAPLH-EE---APQLLCIGLGFGVEKATVESEDLPLRADGLSQAVRAALAEAGCGLEQMDYRLTDISGEQYYFKEASLTLSRNLRVLKPKFDLWHPADCIGECGAAIGPALLAVALAASRKGYGD-------------------------GPNVFCHLGNDAGERAAALLSYRRVRAA |
2GQD Chain:A ((4-412)) | -NKRVVITGMGALSPIGNDVKTTWENALKGVNGIDKITRIDTEPYSVHLAGELKNFNIEDHIDKKEARRMDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAK--GPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALSTNDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYGTTGDAYHITAP--APEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVPNEAQDLDITYAMSNSLGFGGHNAVLVFKKFEA--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GQD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194827 for 3358 contacts (-58.0/contact) +
2D Compatibility (PS) -34972 + (NN) -7214 + (LL) 876
1D Compatibility (HY) -400 + (ID) 2300
Total energy: -238837.0 ( -71.12 by residue)
QMean score : 0.405
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