Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRVNKTVLVLVALVALVLGLTVHKVLTAQRQADPTVLLDAGIVILPQTRKVPALEFTNQD-GQAVSTASLKGRWHLLFFGYTFCPDVCPTTLAQLRELQGKLPQEVRDDLQVVFVSVDP----NRDTPQQIKQYLG------YFNAGFQGLTGTPEN---IQKLANAMSIPYIP---------------ADTSKPNYTVDHSGNLVIIGPDGEQHGFIRAPLNNAKLEAQLPGVLKPQA
2F8A Chain:A ((22-207))
-----------------------------------------------SMQSVYAFSARPLAGGEPVSLGSLRGKVLLIENVASLGG-TTVRDYTQMNELQRRLGPR---GLVVLGFPCNQFGHQENAKNEEILNSLKYVRPGGGFEPNFMLFEKCEVNGAGAHPLFAFLREALPAPSDDATALMTDPKLITWSPVCRNDVAWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALLS---
General information:
TITO was launched using:
RESULT:
Template:
2F8A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65222 for 1211 contacts (-53.9/contact) +
2D Compatibility (PS) -17228 + (NN) -14750 + (LL) 5296
1D Compatibility (HY) -7600 + (ID) 1450
Total energy: -100954.0 ( -83.36 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_2F8A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2F8A-query.scw
PDB file :
Tito_Scwrl_2F8A.pdb
: