Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSSSKLVNAVAQRLLDTIEQGRWVAGQMLPGQRELAEQMEISRPSLREAIMVLETLGVVRSLPGKGVMVLERSEPLREVAAPGEATMEDVLQLRYALEPFIVGIVAQSAGAAEISELRLLLLDLREAVEDGDPQALVEAYTAFHRRLVKLTSNPIFLSVSEQIGSALERSDNLVRRQPEYAEEILQEHDAILRAIRQHDSERASQAMRQHILNEGARLNIDLRLPQV
4EGZ Chain:B ((28-87))
----------VKEEISSWINQGKILPDQKIPTENELMQQFGVSRHTIRKAIGDLVSQGLLYSVQGGGTFVA-------------------------------------------------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4EGZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49086 for 372 contacts (-132.0/contact) +
2D Compatibility (PS) -6660 + (NN) -2760 + (LL) 14344
1D Compatibility (HY) -4400 + (ID) 1000
Total energy: -49562.0 ( -133.23 by residue)
QMean score : 0.757
(partial model without unconserved sides chains):
PDB file :
Tito_4EGZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4EGZ-query.scw
PDB file :
Tito_Scwrl_4EGZ.pdb
: