Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------MRLPANLGRLLPALCLGVLL-----SACST-FGQRDPLRIDLVGLEPLPGQGMEMRFMVKL---------------RVQNPNDEPI-------EYNGIALDLDVNGQPLASGVSDQTG-EVPRFGERVVSVPLTVSA-FSAFRQAWGLSNNAPTQGMPYV--------------VKGK----LAGGLFGTVRFSEKGTLDFSGPAVGAPKTK-GL---- |
| 4O8U Chain:A ((1-227)) | SRIVAADTGGAVLDETFEPIGLIATVAVLVEKPYRSAKEVMVKYANPYDYDLTGRQAIRDEVLLAIELARKVKPDVIHLDSTLGGIELRKLDEPTIDALGISDKGKEVWKELSKDLQPLARKFWEETNIEIVAIGKS--SVPVRIAEIYAGIYSAKWGIENVEKEGHLIIGLPRYMEVNIKDGKIIGRSLDPREGGLYGSAEVSVPEGVKWEIYPNPVARRFMIFEIFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -47510 for 1040 contacts (-45.7/contact) +
2D Compatibility (PS) -16916 + (NN) 1665 + (LL) 384
1D Compatibility (HY) -6400 + (ID) 1500
Total energy: -70277.0 ( -67.57 by residue)
QMean score : 0.013
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