Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSKVVLASQLP-NKRNASLAPGLKQRHVTMLSIAG-----------VIGAGLFVGSGHAIAAAGPAALLAYLIAGTLVVLVMRMLGEMAVASPDTGSFST--YADRSIGRWAG-----FTIGW------------------LYWWFWVLVIPLEAIAAAAILNAWFPAIDTW---IFALAVTFLLTVTNLFSVARYGEFEFWFALLKVIA-----------IIAFIVLGAVAIVGGLPEREVSGLSSLMASHGGFVPNGYGAVLGALLTTMFSFMGT-EIVTIAAAESKDPAKQITRATNSVIWRIGLFYLVSIFIVISIVPWNDPLLIQVGSYQRALELLDIPHAKLIVDLVVLVAVASCL--NSAIYTSSRMVFSLAKRGDAPSVLKLTNTAHVPRPAVLASTAVGFLTTIVNYFAP--EKVFTFLLASSGAVALLVYLVIAVAQLRMR--------KQLQASGQPIEFRMWLYPWLTWAVILFIVAALSIMLIMPEHRHEVFATALLTIFTVCLGLLN------ARRKPRLGEDYAGKTARV--- |
| 1JVN Chain:A ((1-555)) | GSHMPVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPVPEIGWNSCIPSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNKNNIFATQFHPEKSG--KAGLNVIENFLKQQSPPIPNYSAEEKELLMNDYSNYGLTRRIIACLDVRTNDQGDLVVTKGDLGKPVQLAQKYYQQGADEVTFLNITDCPLKDTPMLEVLKQAAKTV----FVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISV----DPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIA--SSGAGVPEHFEEAFLKTRAD-ACLGAGMFHRGEFTVNDVKEYLLE--HGLKVRMDEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -396974 for 3857 contacts (-102.9/contact) +
2D Compatibility (PS) -49952 + (NN) -11455 + (LL) 1172
1D Compatibility (HY) 4400 + (ID) 3500
Total energy: -456309.0 ( -118.31 by residue)
QMean score : 0.139
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