Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGRPQAVPTVQVDNAEVIVTEWRFAPGAETGRHRHGHDYVVVPLTDGTLLLETPEGDRHAPLVAGQAYFRKAGVEHNVINASAHEVVFVETEIK
2B8M Chain:A ((15-100))
-----TKVVEKLVNTEHVQINHIVLPRGEQMPKHYSNSYV-HLIIIKGEMTLTLEDQE-PHNYKEGNIVYVPFNVKMLIQNINSDILEFFVVKAP
General information:
TITO was launched using:
RESULT:
Template:
2B8M.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19428 for 580 contacts (-33.5/contact) +
2D Compatibility (PS) -9717 + (NN) -3183 + (LL) 260
1D Compatibility (HY) -4800 + (ID) 550
Total energy: -37418.0 ( -64.51 by residue)
QMean score : 0.393
(partial model without unconserved sides chains):
PDB file :
Tito_2B8M.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2B8M-query.scw
PDB file :
Tito_Scwrl_2B8M.pdb
: