Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIDLLDNLLFAMVRTGTPLLLVALGELVCERSGVLNLGQEGMMLFGAVIGFMVAFSSGSLWLGVLLAVLAGMLLAALFAGVALYLNANQVACGLALTIFGVGLASFVGAAWVGKPLQGFAPLALPVLGELPLLGRMLFAQDALVYLSLALFAAVAWMLLRSRAGLVLQAVGENPDAASAMGLPVLRVRTLAVLFGGAMAGLAGAYLSLAYTPMWAENMTAGRGWIALALVVFASWRVLRVLLGAWLFGLASILHLVAQGVGLSIPANLLAMLPYAATILVLVLLSRDALRTRLYAPVSLGQPWKAGH |
4LU6 Chain:B ((28-66)) | ------------------------------------------------------------------------------------------------ILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWVRECNASYKVAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRLYRGKTVEPFDYACYMEPVILDANRSPRRLDGSKVTSYAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21868 for 184 contacts (-118.8/contact) +
2D Compatibility (PS) -3969 + (NN) 1908 + (LL) 8508
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -18571.0 ( -100.93 by residue)
QMean score : 0.179
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