Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKHRRTQSRMSVLRRLAAVLGLGACALAAEAAEPLKIGFVYVGPVGDHGWTYQHELGRRELVEHFGDKVKTSFVENVAEGADAERVIRNLAKDGYGLVFTTSFGYMNPTAKVARQFPKVTFEHATGYKRD-RNLGTYLSRSYEGRYVGGFLAAKMTRSHKIGYIASFPIPEVIRDINAIQLALDKYDPQAELKVMWVSTWFDPGKEADAANALID--QGVDVVFQHTDSPA--PIQAAERRG------VYAVGYASDMQHFGPKTVLTSIVNDWGPHYIRSAQAVMDGTWKSEDFWGGLAESTVVLPLNQEVLPAPVREEAGRLIESIRSGAFHPFTGPIRDQSGKERFAAGVSATKADLASMNYYVEGIKADLPK |
| 1DBQ Chain:A ((8-254)) | ----------------------------------KSIGLLATSS--EAAYFAEIIEAVEKNCFQK-G-YTLILGNAWNNLEKQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERG-HREIGVIPGP-----AGRLAGFMKAMEEAMIKVPESWIVQGDF-EPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDNVRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADGPFRDYRR------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102138 for 1831 contacts (-55.8/contact) +
2D Compatibility (PS) -25133 + (NN) -6109 + (LL) 6576
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -134604.0 ( -73.51 by residue)
QMean score : 0.452
|
|
|