Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPADGEAARRADLLKAFLAQRQRMESLVSRWVGCRATAADLVQELFLRFWRRPAAPVEELGSYLLRSARNLAIDHLRGEGSRQRQLDDWLPEQRQGEPVGPEQALEAGDQWRRVEAALRGLPERTRRIFLLNRIHGRTYAEIAQAMQLSQSAVEKHMMRALDACKASLAGPAGEQARSAQP
1S7O Chain:A ((11-75))
------------------------------------------------------------------------------------------------------------RMNALFEFYAALLTDKQMNYIELYYADDYSLAEIADEFGVSRQAVYDNIKRTEKILETYEMKLHMYSDYVVRS
General information:
TITO was launched using:
RESULT:
Template:
1S7O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26441 for 435 contacts (-60.8/contact) +
2D Compatibility (PS) -7353 + (NN) -5588 + (LL) 8160
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -33772.0 ( -77.64 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_1S7O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S7O-query.scw
PDB file :
Tito_Scwrl_1S7O.pdb
: