Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVN-----KDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR
2JWK Chain:A ((19-92))
--------------------------------------------------------GSVPVILEVAGIGKYAISIGGERQEGLTEEMVTQLSRQEFDKDNNTLFLVGGAKEVPYEEVIKALNLLHLAGIK--------
General information:
TITO was launched using:
RESULT:
Template:
2JWK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27038 for 443 contacts (-61.0/contact) +
2D Compatibility (PS) -7659 + (NN) -3489 + (LL) 5588
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -38948.0 ( -87.92 by residue)
QMean score : 0.791
(partial model without unconserved sides chains):
PDB file :
Tito_2JWK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JWK-query.scw
PDB file :
Tito_Scwrl_2JWK.pdb
: