Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSLQSPSDASARNDLVYGLDDRPSAPIALLAALQHL-----------LAIIVPIVTPGLLICQALGVSPRDTNLIVSMSLVISGIATFVQCKRFGPFGAGLLIV------QGTSFNFVGPLIA------------GGALMVK--QGTPVESVMAAIFGVVIAG---------SFVEMGISRILPFVKRLIT-----------PLVTGIVVLMIGLTLIK------------VGLISMGGGFSAMSNGTFANGENLLLSGVVLGIIVVLNRIPVVWMRSCAIVIALAVGYALAGYLGRLDFTGMHQAELFQ-VPTPLHFGLDFSWPLFIPMLVIY----------LVTSLEAIGDVTATSKVSKQPVEGPLW-------MQRIKGGVLVNGANSFLAGIFNTFPSSVFAQNNGVIQLTGVASRYVGLWIAAMLVLLGLFPSVAGVIQAVPEPVLG--GAAMVMFGAVAASGI--NILAGIQLDRRALLIIAVSLALGLGVSQVPEFLAHMPAALRNVLESGVATGGICALLLNWFLPESPVQKAGH----------- |
| 2BVL Chain:A ((1-543)) | ---MSLVNRKQLEKMANVRFRTQEDEYVAILDALEEYHNMSENTVVEKYLKLKDINSLTDICIDTYKKSGRNKALKKFKEYLVTEVLELKN-NNLTPVEKNLHFVWIGGQINDTAINYINQWKDVNSDYNVNVFYDSNAFLINTLKKTVVESAINDTLESFRENLNDPRFDYNKFFRKRMEIIYDKQKNFINYYKAQREENPELIIDDIVKTYLSNEYSKEIDELNTYIEESLNKITQNSGNDVRNFGEFKNGESFNLYEQELV--------ERWNLAAASDILRISALKEIGGMYLDVDMLPGIQPDLFESIEKPSSVTVDFWEMTKLEAIMKYKEYIPEYTSEHFDMLDEEVQSSFESVLASKSDKSEIFSSLGDMEASPLEVKIAFNSKGIINQGLISVKDS--YCSNLIVKQIENRYKILNNSLNPAISEDNDFNTTTNTFIDSIMAEANADNGRFMMELGKYLRVGFFPDVKTTINLSGPEAYAAAYQDLLMFKEGSMNIHLIEADLRNFEISKTNISQSTEQEMASLWSFDDARAKAQFEEYKRNYFEGAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2BVL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -367849 for 3430 contacts (-107.2/contact) +
2D Compatibility (PS) -45793 + (NN) -5517 + (LL) 1564
1D Compatibility (HY) -14000 + (ID) 3150
Total energy: -434745.0 ( -126.75 by residue)
QMean score : 0.192
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