Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLRFALTPGEPAGIGPDLCLLLARSA---QPHPLIAIASRTLLQERAGQLGLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGMITAPVHKGVINEAGIPFSGHTEFLADLTHTA------QVVMMLATRGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERLRGEGLDLIGPLPADTLFTPKHL----------EHCDAVLAMYHDQGLPVLKYKGFGAAVN---VTLG--LPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQMAASRC |
| 3UF6 Chain:A ((18-290)) | -SFVFAVAGAD----D-EVVLETIRLALKQKLGKFLLFGKKEDKTLTANE---S--------------------VTWIQT---DTA-------------EAAAQGAILAVKNKEADILVKGFIPTATLMH---------HVLKKENGLRTDQLLSQIAIFDIPTYHKPLLITD----CAMNVAPKTKEKIAITENALAVAH-QIGITNPKIALLSA----VEEVTAKMPSTLEAQEVVQHFG-NQISVSGPLALDVAISKEAALHKGITDSSAGEADILIAPNIETGNALYKSLVYFAGAKVGSAVVGAKVPIVISSRND------------SPENKLASFILTVRLVE--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3UF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -188040 for 2050 contacts (-91.7/contact) +
2D Compatibility (PS) -26466 + (NN) -6730 + (LL) 2736
1D Compatibility (HY) -3600 + (ID) 1650
Total energy: -223750.0 ( -109.15 by residue)
QMean score : 0.352
|
|
|