Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------MIPQTLTNTNLFIDGVSFAGDVPSLTLPKLAVKTEQYRAGGMDAPVSIDMGLEAMEAKFSTNGARREALNFFGLADQSAFNGVFRGSFKGQKGASVPVVATLRGLLKEVDPGDWKAGEKAEFKYAVAVSYYKLEVDGREVYEIDPVNGVRAINGVDQLAGMRNDLGL--------------------------------------------------------- |
| 4F3V Chain:A ((1-275)) | GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIA---IGGLYGDITYP-------------VTSPLAITMGFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKW---PDKFLAGAAGVAHGVAAANLALFTEAER--RLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPEPKVAAALKDPSYRLKTTTAEQIASRADPWDPGSVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2795 for 1182 contacts (2.4/contact) +
2D Compatibility (PS) -15171 + (NN) -1122 + (LL) 1160
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -18038.0 ( -15.26 by residue)
QMean score : 0.230
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