Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRASFVLLALSCAAPLLSLAEPLRFAGD-DGCPYLCPG-TPQRPGYLVEALSQVLR---EPPHFDSLPWPRAVQMVRDGHRDGLVGAY-GL----DGLRVGSEPIGWVGLAFYTRHDSDWHYSGDASLLGQRLGLAQGYVNNPRFEAWRSQAGDDDLHLQVLGGERVLPRNLQKLLLGRIDVLLEDRDIIEHYLEHHPQLAGQIRRAGELPGRQPLHVGLSPHLPEVDARLAELDEGLRQLRREGTLKVLGERYRLSFE |
| 3VV5 Chain:A ((32-255)) | -----------------IKRSGEIRIGTEGAFPPFNYFDERNQLTGFEVDLGNAIAERLGLKPRWIAQSFDTLLIQLNQGRFDFVIASHGITEERARAVDFT-NPHYCTGGVIVSRKGG---PRTAKDLQGKVVGVQVGTTYMEAAQKI---PG-----IKEVRTYQRDPDALQDLLAGRIDTWITDRFVAKEAIKER-KLENTLQV-GELVFQERVAMAVAKG---NKSLLDALNRALAELMQDGTYARISQKWFGEDV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89014 for 1765 contacts (-50.4/contact) +
2D Compatibility (PS) -22773 + (NN) -8444 + (LL) 2372
1D Compatibility (HY) -7200 + (ID) 1850
Total energy: -126909.0 ( -71.90 by residue)
QMean score : 0.413
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