Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQQFERSPSESYFWPVVLAVVLHVLIFAMLFVSWAFAPELPPSKPIVQATLYQLKSKSQATTQTNQKIAGEAKKTASKQYEVEQLEQKKLEQQKLEQQKLEQQQVAAAKAAEQKKADEARKAEAQKAAEAKKADEAKKAAEAKAAEQKKQADIAKKRAEDEAKKKAAEDAKKKAAEDAKKKAAEEAKKKAAAEAAKKKAAVEAAKKKAAAAAAAARKAAEDKKARALAELLSDTTERQQALADEVGSEVTGSLDDLIVNLVSQQWRRPPSARNGMSVEVLIEMLPDG-TITNASVSRSSGDKPFDSSAVAAVRNVGRIPEMQQLPRATFDSLYRQRRIIFKPEDLSL |
| 4G7X Chain:B ((254-355)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NNAARQQFVTSEVGRYGAIYTQLIRQNLLVEDSFR-GKQCRVNLKLIPTGTGALLGSLTVLDGDSRLCAATKRAVAQVNSFPLPK--DQPDVVEKLKNINLTVAP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G7X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37161 for 683 contacts (-54.4/contact) +
2D Compatibility (PS) -10814 + (NN) -2758 + (LL) 24000
1D Compatibility (HY) -4400 + (ID) 900
Total energy: -32033.0 ( -46.90 by residue)
QMean score : 0.338
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