Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARKNAVKDNLEQIQHQSYSELQELLSEANSMLADSAAFAGDKADSARARIGALLEKANDALGKGGSAVAERSRHAVDATESYIGANPWQTVAITTAVGLLAGFLLGRRS
1V66 Chain:A ((1-65))
---MADSAELKQMVMSLRVSELQVLLGYAGR------NKHGRKHELLTKALHLLKAGCSPAVQMKIKELYRRRF------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1V66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3403 for 447 contacts (7.6/contact) +
2D Compatibility (PS) -6989 + (NN) -1600 + (LL) 3588
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -4198.0 ( -9.39 by residue)
QMean score : 0.431
(partial model without unconserved sides chains):
PDB file :
Tito_1V66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V66-query.scw
PDB file :
Tito_Scwrl_1V66.pdb
: