Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRIDTPPGFAVYPSASPKAANLPAVDQVLAFEQALGGEPPAAGRRLAGLENGALGERLLQRFAQ---PLQGLEADRLELKAMLRAELPLGRQQQTFLLQLLGAVEHAPGGEYLAQLARRELQVLIPLNGMLDNLVRNSHKLDLES
1Z21 Chain:A ((60-145))
-------------------------------------PDHAVLEVLATPVREAL-----LARFGQHQGSV-VPAIDLPELRSVLQQFDSFGKRWEAILLQVLEGI-----LPYLSELINKELMILL--------------------
General information:
TITO was launched using:
RESULT:
Template:
1Z21.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25905 for 497 contacts (-52.1/contact) +
2D Compatibility (PS) -8519 + (NN) -6107 + (LL) 3396
1D Compatibility (HY) -6800 + (ID) 950
Total energy: -44885.0 ( -90.31 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_1Z21.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Z21-query.scw
PDB file :
Tito_Scwrl_1Z21.pdb
: