Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLVAIHGLIHRLGLYGEHLEGALVNDSEALYAHPATYYRREDLLPAFESNEALRERFFGGVKKPIFTSANAHNHLVGLAEVLAMYLLVWSPAPWRLVRLEPPPGLDARHAQRFAGERRHIEAFRDGLPRVARALAHISSLMIFDDHDITDDWNLSARWELTAYGHPFSRRIIGNALLAYLLCQGWGNDPQHCGEWLAPVAALMEGAAADGRLPCAEQDRLLDALLDFQHWHYRLPGSPTLIVLDTRTRRWRSERNLGRPSGLMDWEALSEFQQDLL----GEKAAIIVSPAPMFGVKLIEGVQKLFSWIGQPLLVDAENWMAHRGAASVMMNIFRHSRTPGNYLILSGDVHYSFVYDIRIRHRERGPRLWQITSSGIKNEFPRRLLDWFDRLNRWLYAPWSPLNWLTQRRSLEIRPRVPQHSQAGERLWNSAGIGQVFIGEDGRPRAVLQVNADGSPATAFERHRDVEDERADQSPVAPGR |
3TGH Chain:A ((150-252)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAAAFIFIDTWVLSSNF------PYKKIHEKAWNDLKSQLSVAKKIADFIIVVGDQPIYSSGYS---------------------RGSSYLAYYLLPLLKD---AEVDLYISGHDNNMEVIED--------NDMAHITCGSGSMSQGKSGMKNSKSLFFSSDIGFCVHELSNNGIVTKFVSSKKGEVIYTHKLNIKKKKTLDKVNALQHFAALPNVELTDVPSSGPMG------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TGH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60251 for 706 contacts (-85.3/contact) +
2D Compatibility (PS) -11232 + (NN) -9533 + (LL) 20332
1D Compatibility (HY) -5200 + (ID) 800
Total energy: -66684.0 ( -94.45 by residue)
QMean score : 0.362
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