Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQRSAAHYSSRSAAPIVERHPRREFPILRFCEPPVEGDASFINPSEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD
3EAT Chain:X ((1-293))
GHMNAYLSDQPVRLSPLRDEQGNQPRFGLLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAESLTRYCHDFGEVMLWPFGAVLELVEQEGAEDHIFANNYVPLHWDGMYLETVPEFQVFHCVDAPGDSDGGRTTFSSTPAALQLADSSELELWRRASGRYQ-----RSSRSAAPIVERHPRREFPILRFCEPP----------SEFHYDGIAPEQRGELLASLRRCLYHPQAHYAHRWRSDDLVIADNLTLLHGREAFAHRAPRHLRRVHIHAEPALRNPHLQRD
General information:
TITO was launched using:
RESULT:
Template:
3EAT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146956 for 2160 contacts (-68.0/contact) +
2D Compatibility (PS) -29122 + (NN) -15479 + (LL) 684
1D Compatibility (HY) -34400 + (ID) 13750
Total energy: -239023.0 ( -110.66 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3EAT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EAT-query.scw
PDB file :
Tito_Scwrl_3EAT.pdb
: