Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTERKRWLAGCLSALLSLPLAAAVPGPDAPADLARGKAMAQKMCSRCHDDDGNGGPRPNRSYPKLAGLDREYLYKQIYDLKTQRRRNPATNGRGEELSAADVVNVSAWFAAQRMSAGEQTLADPRQRERGRQLFENGLAQRGVPPCVTCHGPAAQGLAALKAPRLAGQWAEYLATQLHGFRDGKRGNSATMRAVAGGLEDSHIQALAGYLGSLGP |
| 4O1W Chain:B ((2-78)) | -------------------------------DAAAGKAKSV-MCAACH---GAAGVSAVPTYPNLAGQKEAYLTKQLNDFKSGKRNDPTMKGMVMALSPADMENLAAYYANM------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4O1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11796 for 526 contacts (-22.4/contact) +
2D Compatibility (PS) -8238 + (NN) -5266 + (LL) 7252
1D Compatibility (HY) -3200 + (ID) 1600
Total energy: -22848.0 ( -43.44 by residue)
QMean score : 0.453
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