Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------------------MNAIPLEHGLALASVLFA---------LGLVGLMVRRNILFVLMSLEVMMNAAALAFVVAGSRWGQPDGQVMFILVLSLAAAEASIGLAILLQLYRRFHT----------LDIDAASEMRG
2CR9 Chain:A ((1-139))
GSSGSSGKSEKRMKLTLKGGAAVDPDSGLEHSAHVLEKGGKVFSATLGLVDIVKGTNSYYKLQLLEDDKENRYWIFRSWG-RVGTVIGSNKLEQMPSKEDAIEHFMKLYEEKTGNAWHSKNFTKYPKKFYPLEISGPSSG
General information:
TITO was launched using:
RESULT:
Template:
2CR9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -85435 for 632 contacts (-135.2/contact) +
2D Compatibility (PS) -10466 + (NN) 2111 + (LL) -28
1D Compatibility (HY) 800 + (ID) 1000
Total energy: -94018.0 ( -148.76 by residue)
QMean score : 0.214
(partial model without unconserved sides chains):
PDB file :
Tito_2CR9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CR9-query.scw
PDB file :
Tito_Scwrl_2CR9.pdb
: